Don’t let Fusarium Head Blight Keep You Down – Prepare Now to Harvest Those Scabby Wheat Fields

Damon L. Smith, Extension Field Crops Pathologist, University of Wisconsin-Madison
Shawn P. Conley, Extension Soybean and Small Grains Agronomist, University of Wisconsin-Madison

Figure 1. FHB on some wheat heads. Note the bleached and reddened appearance of infected kernels.

Fusarium head blight (FHB) or scab has been observed at moderate to high levels in some Wisconsin winter wheat fields this season. Incidence and severity have been variable by location, susceptibility of the wheat variety, and if a fungicide was applied at or shortly after anthesis. Generally, we have observed more FHB in the southern and south-central wheat growing areas of the state, but it can be found just about everywhere we have visited this year. It is important to scout your maturing wheat crop and consider how much damage from FHB might be in a field as you prepare for harvest. While FHB can cause direct yield loss, the fungus that causes this disease can also produce deoxynivalenol (also known as DON or vomitoxin). Assessing wheat fields now can assist you in determining how much vomitoxin might be expected at harvest. However, it is possible to find high levels of vomitoxin in finished grain, even if FHB levels where low.

What does scab look like? Diseased spikelets on an infected grain head die and bleach prematurely (Fig. 2).  Healthy spikelets on the same head retain their normal green color.  Over time, premature bleaching of spikelets may progress throughout the entire grain head.  If infections occur on the stem immediately below the head, the entire head may die.  As symptoms progress, developing grains are colonized causing them to shrink and wrinkle.  Often, infected kernels have a rough, sunken appearance, and range in color from pink or soft gray, to light brown. As wheat dries down, visual inspection of heads for scab will become more difficult.

Figure 2. Fusarium head blight of winter wheat

Why is identifying scab important? Scab identification is important, not only because it reduces yield, but also because it reduces the quality and feeding value of grain.  In addition, the FHB fungus may produce mycotoxins, including DON or vomitoxin, that when ingested, can adversely affect livestock and human health.  The U.S. Food and Drug Administration has set maximum allowable levels of DON in feed for various animal systems, these are as follows: beef and feedlot cattle and poultry < 10ppm; Swine and all other animals < 5ppm. In addition, local grain elevators test for DON and discount loads of grain for unacceptable levels of the mycotoxin. Be sure to check with your local elevator about their thresholds for docking grain and discount schedule based on the level of DON detected BEFORE you bring a load for delivery.

What should I do to prepare for wheat harvest?

  1. Scout your fields now to assess risk. Wheat is maturing rapidly. As maturity progresses it will be increasingly difficult to assess the incidence and severity of the infection. Understanding a field’s risk will help growers either field blend or avoid highly infected areas so entire loads are not rejected.
  2. DO NOT spray fungicide now. Research has demonstrated that the window of opportunity to manage FHB with fungicides is at the beginning of anthesis and only lasts about 7 days. Applications later than 7 days after the start of anthesis are not effective in controlling FHB. In addition, most fungicide labels do not allow a pre-harvest interval (PHI) suitable for a late application on wheat. Any application now would be off-label.
  3. Adjust combine settings to blow out lighter seeds and chaff. Salgado et al. 2011 indicated that adjusting a combine’s fan speed between 1,375 and 1,475 rpms and shutter opening to 90 mm (3.5 inches) resulted in the lowest discounts that would have been received at the elevator due to low test weight, % damaged kernels, and level of the mycotoxin deoxynivalenol (DON; vomitoxin) present in the harvested grain.
  4. Know your elevators inspection and dockage procedure and discount schedule (each elevator can have a different procedure and discount rate).
  5. Scabby kernels does not necessarily mean high DON levels and vice versa. For example, in a 2014 fungicide evaluation very low visible levels of FHB were observed for all treatments. However, when the finished grain was tested for DON, significant levels were identified for all treatments. Be sure to test and know what levels of DON are in your grain even if you didn’t see a high level of visible disease. Also, don’t assume that because a fungicide was used, there will be no DON.
  6. DON can be present in the straw so there is concern regarding feeding or using scab infected wheat straw.  DO NOT use straw for bedding or feed from fields with high levels of scab (Bissonnette et al., 2018; Cowger and Arellano, 2013). If in doubt, have the straw tested for DON levels.
  7. Do not save seed from a scab-infected field. Fusarium graminearum can be transmitted via seed. Infected seeds will have decreased growth and tillering capacity as well as increased risk for winterkill.
  8. Do not store grain from fields with high levels of scab.  DON and other mycotoxins can continue to increase in stored grain.
  9. Harvest in a timely fashion to minimize elevator discounts and balance dockage due to FHB. Click here to read about some recent research on optimizing harvest timing in winter wheat.
  10. For more information on Fusarium head blight click here.


  1. Bissonnette, K.M., Kolb, F.L., Ames, K.A., and Bradley, C.A. Effect of Fusarium head blight management practices on mycotoxin accumulation of wheat straw. Plant Dis. 102:1141-1147.
  2. Cowger, C., and Arellano, C. 2013. Fusarium graminearum infection and deoxynivalenol concentrations during development of wheat spikes. Phytopathology 103:460-471.
  3. Salgado, J. D., Wallhead, M., Madden, L. V., and Paul, P. A. 2011. Grain harvesting strategies to minimize grain quality losses due to Fusarium head blight in wheat. Plant Dis. 95:1448-1457.